Paper Review Records
All Paper Review Records
13 valid samples · Newest publication first
Review days = acceptance date − received date. PDF, DOI, and publisher-page sources are retained.
Genome-wide assessment of genetic diversity and population structure in Gayal ( Bos frontalis ) using whole-genome resequencing
AuthorsRuiyang Li; Xiaodong Wang; Yuan Zhang; Maosheng Cao; Wei Guo; Quan Ji; Yonghong Ju; Jinhong Luo; Qingwei Wang; Yanfei Wang; Xiang Chen
Affiliations1. College of Animal Science, Guizhou University, Guiyang, China; 2. Key Laboratory of Animal Genetics, Breeding and Reproduction in the Plateau Mountainous Region, Ministry of Education, Guizhou University, Guiyang, China
Enhancing detection of polygenic adaptation: a comparative study of machine learning and statistical approaches using simulated evolve-and-resequence data
AuthorsCosima Caliendo; Susanne Gerber; Markus Pfenninger
Affiliations1. Institute of Human Genetics, University Medical Center, Johannes Gutenberg University Mainz, Mainz, Germany; 2. Departument of Molecular Ecology, Senckenberg Biodiversity and Climate Research Centre, Frankfurt am Main, Germany; 3. LOEWE Centre for Translational Biodiversity Genomics, Senckenberg Biodiversity and Climate Research Centre, Frankfurt am Main, Germany; 4. Institute for Molecular and Organismic Evolution, Johannes Gutenberg University, Mainz, Germany
Transcriptomic analysis of eggs, rediae and cercariae reveal stage-specific adaptations in the rumen fluke Calicophoron daubneyi
AuthorsLeah R. Knöpfle; Raúl O. Cosentino; Markus R. Schmidt; Verena K. Elbert; Sandra Haug; Frank Weber; Antonio Vazquez Perera; T. Nicolai Siegel; Markus Meissner
Affiliations1. Clinic for ruminants with Ambulatory and Herd Health Services, Ludwig-Maximilians-Universität München, Oberschleißheim, Germany; 2. Chair for Experimental Parasitology, Faculty of Veterinary Medicine, Ludwig-Maximilians-Universität München, Munich, Germany; 3. Biomedical Center, Division of Physiological Chemistry, Faculty of Medicine, Ludwig-Maximilians-Universität München, Munich, Germany; 4. Institut de Recherche pour le Développement, Université de Montpellier, Montpellier, France
Integrating deep learning and pangenomics to recover missing heritability from wild structural variations
AuthorsYiquan Wang; Minnuo Cai; Yahui Ma; Aurélien Tellier; Kai Wei
Affiliations1. Xinjiang Key Laboratory of Biological Resources and Genetic Engineering, College of Life Science and Technology, Xinjiang University, Urumqi, China; 2. College of Mathematics and System Science, Xinjiang University, Urumqi, China; 3. Shenzhen X-Institute, Shenzhen, China; 4. Population Genetics, Department of Life Science Systems, School of Life Sciences, Technical University of Munich, Freising, Germany
Genome-wide characterization of the bZIP gene family in Rattus norvegicus and expression profiling analysis during brain development
AuthorsPan Lu; Zongjun Zhu; Yuanyuan Guan; Ya Wang; Ruiquan Chen; Hongbo Xiao
Affiliations1. The First Affiliated Hospital of Anhui University of Chinese Medicine, Hefei, China
A hybrid and cost-efficient barcoding strategy for full-length 16S rRNA gene nanopore sequencing of environmental samples
AuthorsIda Romano; Edoardo Pasolli; Jean-Claude Walser; Valeria Ventorino; Sonja Reinhard; Giuseppina Magaraci; Olimpia Pepe; Natacha Bodenhausen
Affiliations1. Department of Agricultural Sciences, Division of Microbiology, University of Naples Federico II, Naples, Portici, Italy; 2. Task Force on Microbiome Studies, University of Naples Federico II, Naples, Italy; 3. Genetic Diversity Centre (GDC), ETH Zurich, Zurich, Switzerland; 4. Department of Soil Sciences, Research Institute of Organic Agriculture FiBL, Frick, Switzerland
SNP genotyping in Pseudotsuga menziesii and Pinus radiata using targeted genotyping-by-sequencing (GBS): improved Bayesian SNP calling using a beta-binomial distribution and other optimized input parameters
AuthorsJia Guo; Gancho Slavov; Liam W. Gilson; Douglas A. Maguire; Anna C. Magnuson; Natalie Graham; Tancred Frickey; Glenn T. Howe
Affiliations1. Pacific Northwest Tree Improvement Research Cooperative, College of Forestry, Oregon State University, Corvallis, USA; 2. LGC Biosearch Technology, Alexandria, United States of America; 3. Department of Forest Engineering, Resources, and Management, College of Forestry, Oregon State University, Corvallis, USA; 4. Radiata Pine Breeding Company, Rotorua, New Zealand; 5. Scion Group, New Zealand Institute for Bioeconomy Science, Rotorua, New Zealand; 6. Center for Planted-Forest Silviculture, College of Forestry, Oregon State University, Corvallis, USA
Conservation of Long G4-rich (LG4) genomic enhancer regulations
AuthorsMichael H. Shaw; Jeffrey D. DeMeis; Claire A. Arnold; Makala R. Cox; Tien C. Duong; Kyle A. Gaviria; Grace K. McDavid; Jose M. Villegas; Margaret L. Weimer; Suhas S. Patil; Shahem Y. Alqudah; Glen M. Borchert
Affiliations1. Department of Pharmacology, Frederick P. Whiddon College of Medicine, Mobile, USA; 2. Department of Molecular Biology, Massachusetts General Hospital, Boston, USA; 3. Department of Genetics, Harvard Medical School, Boston, USA; 4. Department of Biology, University of South Alabama, Mobile, USA; 5. Department of Biomedical Sciences, University of South Alabama, Mobile, USA; 6. College of Medicine, Florida State University, Tallahassee, USA
Genomic characteristics and geographical distribution of uncultivated soil prokaryotes
AuthorsÁlvaro Rodríguez del Río; Yongxing Cui; India Mansour; Matthias C. Rillig
Affiliations1. Institute of Biology, Freie Universität Berlin, Berlin, Germany; 2. Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
Phylogenetic analysis of the bacterial intracellular R-body killer proteins indicates extensive horizontal gene transfer and signature Reb sequence motifs
AuthorsLennart Dörr; Robin Ghosh; Michael Schweikert
Affiliations1. Department of Biobased Materials, Institute of Biomaterials and Biomolecular Systems, University of Stuttgart, Stuttgart, Germany; 2. Institute of Energy Efficiency in Production, University of Stuttgart, Stuttgart, Germany; 3. SRF Advanced Materials Innovation and Characterization (AMICA), University of Stuttgart, Stuttgart, Germany
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