Paper Review Records
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Sequence-dependent genesis of similar collective states in DNA molecules under low external torque
AuthorsLiliya Fedulova; Аnna Dorohova; Irina Chernukha; Ekaterina Vasilevskaya; Mikhail Drobotenko; Stepan Dzhimak
Affiliations1. Experimental Clinic-Laboratory of Biologically Active Substances of Animal Origin, The V. M. Gorbatov Federal Research Center for Food Systems, Russian Academy of Sciences; 2. Laboratory of Problems of Stable Isotope Spreading in Living Systems, Federal Research Center the Southern Scientific Center of the Russian Academy of Sciences; 3. Faculty of Physics and Technology, Kuban State University
Intrinsic conformational dynamics of apo HIV-2 protease reveal two dynamical stages and multiple closed flap states
AuthorsMarine Baillif; Phuong Nhung Cao; Leslie Regad
Affiliations1. CNRS, Inserm, Unité de Biologie Fonctionnelle et Adaptative, Université Paris Cité
Conserved structural dynamics of MTHFR2 link one-carbon metabolism to metabolite-based plant immunity
AuthorsReecha Mohapatra; Abhijit Debnath; Arya Kumar Dibyananda Naik; Rishi Kesh; Biswa Ranjan Meher; Akhilesh Mishra; Binod Bihari Sahu
Affiliations1. Department of Life Science, National Institute of Technology Rourkela; 2. Department of Pharmacy, Noida Institute of Engineering and Technology, Greater Noida; 3. Department of Botany, Berhampur University
R1334 stabilizes the force-bearing von Willebrand factor A1–GPIbα interface
AuthorsYue Cheng; Zhipeng Xu
Affiliations1. School of Mathematics and Statistics, Nantong University; 2. Laboratory of Biostatistics and Computational Medicine, Nantong University
Characterisation of hydrophobic interactions of ubiquinol with AtAOX and EsAOX isoforms by site-directed mutagenesis, molecular dynamics and docking
AuthorsVarsha Venugopalan; Rajesh Parsanathan; Dinakar Challabathula; Kavya Bakka
Affiliations1. Department of Microbiology, School of Life Sciences, Central University of Tamil Nadu; 2. Department of Biotechnology, School of Integrative Biology, Central University of Tamil Nadu
Structural and energetic modulation of the raloxifene–STAT3 complex by metformin and cisplatin: implications for disrupting STAT3 signaling
AuthorsShoaleh Sheibani; Nahid Babaei; Maryam Tehranipour; Javad Baharara
Affiliations1. Department of Molecular Cell Biology and Genetics, Bu.C., Islamic Azad University; 2. Department of Biology, Ma.C., Islamic Azad University
Site-specific post-translational modifications regulate the binding affinity of Conus amadis α-conotoxin Am2005 to Ac-AChBP
AuthorsShweta Dhannura; Marimuthu Vijayasarathy; Kashibai Patil; Bharathi Manjunath; Rajesh Sonti; Prasanna D. Revanasiddappa; Konkallu Hanumae Gowd
Affiliations1. Department of Chemistry, School of Chemical Sciences, Central University of Karnataka; 2. Prayoga Institute of Education Research; 3. Department of Biotechnology, Siddaganga Institute of Technology; 4. Department of Pharmaceutical Analysis, National Institute of Pharmaceutical Education and Research (NIPER)
An intelligent and parameter-efficient fine-tuning of protein language model for dephosphorylation site prediction
AuthorsAnurag Singh; P. K. Singh; Rohit Kumar Tiwari
Affiliations1. Department of Computer Science and Engineering, Madan Mohan Malaviya University of Technology (MMMUT)
Structural and dynamic characterization of MirA-like xenosiderophore transporters in Fusarium: in silico modeling and in vitro validation
AuthorsAshutosh Singh; Azmi Khan; Micky Anand; Pratika Singh; Ravinsh Kumar; Abhilash K. Tilak; Amrita Srivastava
Affiliations1. Department of Life Science, School of Earth, Biological and Environmental Sciences, Central University of South Bihar; 2. Laboratory of Cell Signalling, Centre for DNA Fingerprinting and Diagnostics; 3. Department of Biochemistry, Indian Institute of Science; 4. National Centre for Polar and Ocean Research; 5. Department of Mechanical and Industrial Engineering, Manipal Institute of Technology Bengaluru, Manipal Academy of Higher Education
Deciphering the conformational change and inhibition of Thermus thermophilus laccase in ionic liquid
AuthorsRokesh Radhakrishnan; Amit Ghosh
Affiliations1. P.K. Sinha Centre for Bioenergy and Renewables, Indian Institute of Technology Kharagpur; 2. School of Energy Science and Engineering, Indian Institute of Technology Kharagpur; 3. Department of Bioscience and Biotechnology, Indian Institute of Technology Kharagpur
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