Nature Microbiology

AuthorsVéronique Paris; Andrew H. Buultjens; Nicholas Bell; Thomas L. Schmidt; Wendy M. Bamberg; Michael T. Birrell; Finn Romanes; Catarina A. Antao; Maria Globan; Caroline Lavender; Katherine Bond; Sally Dougall; Jake A. Lacey; Yichen Zhai; Peihong Guo; Norelle L. Sherry; Katherine B. Gibney; Jue Tao Lim; Paul D. R. Johnson; Timothy P. Stinear; Ary A. Hoffmann

Affiliations1. Pest and Environmental Adaptation Research Group, School of BioSciences, Bio21 Institute, University of Melbourne, Parkville, Australia; 2. Department of Microbiology and Immunology, Doherty Institute, University of Melbourne, Melbourne, Australia; 3. School of Life and Environmental Sciences, University of Sydney, Camperdown, New South Wales, Australia; 4. Western Public Health Unit, Western Health, St Albans, Australia; 5. Department of Health, Melbourne, Australia; 6. WHO Collaborating Centre for Mycobacterium ulcerans, Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, Doherty Institute, Melbourne, Australia; 7. Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, Doherty Institute, University of Melbourne, Melbourne, Australia; 8. Lee Kong Chian School of Medicine, Nanyang Technological University, Singapore, Singapore; 9. Department of Infectious Diseases and Immunology, Austin Health, Heidelberg, Australia; 10. WHO Collaborating Centre for Antimicrobial Resistance, Doherty Institute, University of Melbourne, Melbourne, Australia; 11. Victorian Infectious Diseases Service, Royal Melbourne Hospital, Doherty Institute, Melbourne, Australia; 12. Department of Infectious Diseases, University of Melbourne, Doherty Institute, University of Melbourne, Melbourne, Australia; 13. Centre for Pathogen Genomics, University of Melbourne, Doherty Institute, University of Melbourne, Melbourne, Australia

AuthorsThomas C. A. Hitch; Mitsuo Sakamoto; Jörg Overmann; Thomas Clavel

Affiliations1. Functional Microbiome Research Group, Institute of Medical Microbiology, RWTH Aachen University Hospital, Aachen, Germany; 2. Department of Anaesthesia and Intensive Care, The Chinese University of Hong Kong, Hong Kong SAR, China; 3. Microbe Division/Japan Collection of Microorganisms, RIKEN BioResource Research Center, Tsukuba, Japan; 4. NODAI Culture Collection Center, Tokyo NODAI Research Institute, Tokyo University of Agriculture, Tokyo, Japan; 5. Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany; 6. Bavarian State Collections of Natural History, Munich, Germany; 7. Molecular Diversity Research, Faculty of Biology, Ludwig-Maximilians-Universität München, Munich, Germany

AuthorsYulin Song; J. Elijah Powell; Joel W. H. Wong; Yunxi Liu; Miguel A. Aguilar Ramos; Tyler De Jong; Patrick J. Lariviere; Jayaditya Maganti; Emily P. Balskus; Nancy A. Moran

Affiliations1. Department of Integrative Biology, University of Texas, Austin, USA; 2. Department of Chemistry and Chemical Biology, Harvard University, Cambridge, USA; 3. Department of Molecular Biosciences, University of Texas, Austin, USA; 4. Howard Hughes Medical Institute, Harvard University, Cambridge, USA

AuthorsIrma Tedja; Harshini Weerasinghe; Garrett Bryak; Helen Stölting; Tricia L. Lo; Claudia Simm; Angavai Swaminathan; Calvin A. Kraupner-Taylor; Paul F. Harrison; Françios A. B. Olivier; Michael J. McDonald; Shankar Thangamani; Traude H. Beilharz; Ana Traven

Affiliations1. Department of Biochemistry and Molecular Biology and the Infection Program, Biomedicine Discovery Institute, Monash University, Clayton, Australia; 2. Department of Comparative Pathobiology, College of Veterinary Medicine, Purdue University, West Lafayette, USA; 3. Department of Biochemistry and Molecular Biology and the Development and Stem Cells Program, Biomedicine Discovery Institute, Monash University, Clayton, Australia; 4. Genomics and Bioinformatics Platform, Monash University, Clayton, Australia; 5. School of Biological Sciences, Monash University, Clayton, Australia

AuthorsGhada Yousif; Francisco Zorrilla; Swagatika Dash; Leonardo Oña; Aditi Shekhar; Samir Giri; Rui Guan; Sharvari Harshe; Michael Itermann; Daphne Welter; Vladimir Benes; Kiran R. Patil; Christian Kost

Affiliations1. Division of Ecology, School of Biology/Chemistry, Osnabrück University, Osnabrück, Germany; 2. Experimental Ecology and Evolution Group, Department of Bioorganic Chemistry, Max Planck Institute of Chemical Ecology, Jena, Germany; 3. Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni-Suef, Egypt; 4. Medical Research Council Toxicology Unit and Department of Biochemistry, University of Cambridge, Cambridge, UK; 5. Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Zurich, Zurich, Switzerland; 6. Genomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany

AuthorsAshleigh Kropp; Kazem Asadollahi; Jamie A. Stapleton; Luka Simsive; Pok Man Leung; Rachel L. Darnell; Christopher K. Barlow; Benjamin G. Hartmann; Nicholas D. J. Yates; Tasha Lumbantobing; Daniel R. Fox; Chris Greening; Oleksii Zdorevskyi; Vivek Sharma; James N. Blaza; Alison Parkin; Rhys Grinter

Affiliations1. Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Australia; 2. Centre for Electron Microscopy of Membrane Proteins, Monash Institute of Pharmaceutical Sciences, Parkville, Australia; 3. Department of Microbiology, Biomedicine Discovery Institute, Monash University, Clayton, Australia; 4. Department of Chemistry, University of York, York, UK; 5. Department of Physics, University of Helsinki, Helsinki, Finland; 6. Centre for Bacterial Cell Biology, Newcastle University Biosciences Institute, Newcastle University, Newcastle-upon-Tyne, UK; 7. Monash Proteomics and Metabolomics Platform, Department of Biochemistry, Monash Biomedicine Discovery Institute, Monash University, Clayton, Australia; 8. York Structural Biology Laboratory, Department of Chemistry, University of York, York, UK; 9. HiLIFE Institute of Biotechnology, University of Helsinki, Helsinki, Finland

AuthorsYumary M. Vasquez; Tiago Nardi; Gbocho Masato Terasaki; Petra Byl; Tomáš Brůna; Juan C. Villada; Miguel F. Romero-Gutiérrez; Thomas Mock; Timothy Y. James; Tanja Woyke; Frederik Schulz

Affiliations1. United States Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, USA; 2. Department of Biology and Biotechnology, University of Pavia, Pavia, Italy; 3. Department of Applied Mathematics, University of California, Merced, Merced, USA; 4. School of Ocean and Earth Science and Technology, University of Hawai’i Mānoa, Honolulu, USA; 5. Instituto de Biología, Universidad Nacional Autónoma de México, Mexico City, Mexico; 6. School of Environmental Sciences, University of East Anglia, Norwich, UK; 7. Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, USA; 8. Life and Environmental Sciences, University of California, Merced, Merced, USA

AuthorsJasper B. Gomez; Jeffrey E. Barrick; Christopher M. Waters

Affiliations1. Department of Microbiology, Genetics, & Immunology, Michigan State University, East Lansing, USA; 2. Department of Entomology, Michigan State University, East Lansing, USA

AuthorsMarie-Madlen Pust; Ahmed M. T. Mohamed; Martin Stražar; Aranzazu Arias-Rojas; Edward Cunningham-Oakes; Eric M. Brown; Amanda Bumber; Gleb Pishchany; Chenhao Li; Ashwin N. Ananthakrishnan; Alistair C. Darby; Hera Vlamakis; Damian R. Plichta; Ramnik J. Xavier

Affiliations1. Broad Institute of MIT and Harvard, Cambridge, USA; 2. Center for Computational and Integrative Biology, Massachusetts General Hospital, Harvard Medical School, Boston, USA; 3. Department of Molecular Biology, Massachusetts General Hospital, Harvard Medical School, Boston, USA; 4. Department of Infection Biology and Microbiomes, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK; 5. NIHR Health Protection Research Unit in Gastrointestinal Infections, Liverpool, UK; 6. Department of Clinical Infection, Microbiology and Immunology, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK; 7. Division of Gastroenterology, Massachusetts General Hospital, Boston, USA; 8. Center for Genomic Research, Institute of Integrative Biology, University of Liverpool, Liverpool, UK; 9. Center for Microbiome Informatics and Therapeutics, Massachusetts Institute of Technology, Cambridge, USA

AuthorsLandon J. Getz; Amy L. Qian; Y. Vivian Liu; Sam R. Fairburn; Mahnoor S. Butt; Yan-Jiun Lee; Peter R. Weigele; Karen L. Maxwell

Affiliations1. Department of Biochemistry, University of Toronto, Toronto, Canada; 2. Research Department, New England Biolabs, Ipswich, USA