生物学
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The emergence of the fractal bronchial tree
作者Malte Mederacke; Kevin A. Yamauchi; Nikolaos Doumpas; Laura Schaumann; Jonathan Sperl; Thomas Weikert; D. Merrill Dane; Connie C.W. Hsia; Maurice Pradella; Jens Bremerich; Roman Vetter; Dagmar Iber
作者单位Department of Biosystems Science and Engineering, ETH Zürich, Schanzenstrasse 44, 4056 Basel, Switzerland; Swiss Institute of Bioinformatics, Schanzenstrasse 44, 4056 Basel, Switzerland; Siemens Healthineers, 91301 Forchheim, Germany; Department of Radiology, University Hospital Basel, University of Basel, Petersgraben 4, 4031 Basel, Switzerland; Department of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, TX, USA
Living bacterial reservoir computers for information processing and sensing
作者Paul Ahavi; Thi-Ngoc-An Hoang; Philippe Meyer; Sylvie Berthier; Federica Fiorini; Florence Castelli; Olivier Epaulard; Audrey Le Gouellec; Jean-Loup Faulon
作者单位University Paris Saclay, INRAE, AgroParisTech, MICALIS Institute, 78350 Jouy-en-Josas, France; University Grenoble Alpes, CNRS, CHU Grenoble, Grenoble INP, TIMC-IMAG UMR 5525, 38000 Grenoble, France; University Paris Saclay, CEA, INRAE, Médicaments et Technologies pour la Santé (MTS), MetaboHUB, 91190 Gif-sur-Yvette, France; Department of Drug Metabolism & Pharmacokinetics, Boehringer Ingelheim Pharma GmbH & Co. KG, Biberach, Germany; Infectious Diseases Department, Grenoble-Alpes University Hospital, 38000 Grenoble, France
High-throughput DNA engineering by mating bacteria
作者Takeshi Matsui; Po-Hsiang Hung; Han Mei; Xianan Liu; Fangfei Li; John Collins; Weiyi Li; Darach Miller; Neil Wilson; Esteban Toro; Geoffrey J. Taghon; Gavin Sherlock; Sasha Levy
作者单位BacStitch DNA, Inc., Los Altos, CA, USA; SLAC National Accelerator Laboratory, Menlo Park, CA, USA; Stanford Department of Genetics, Palo Alto, CA, USA; Twist Biosciences, Inc., South San Francisco, CA, USA; National Institute of Standards and Technology, Gaithersburg, MD, USA
Scalable enumeration and sampling of minimal metabolic pathways for organisms and communities
作者Ove Øyås; Axel Theorell; Jörg Stelling
作者单位Department of Biosystems Science and Engineering and SIB Swiss Institute of Bioinformatics, ETH Zurich, Basel, Switzerland; Oslo Centre for Biostatistics and Epidemiology, Oslo University Hospital, Oslo, Norway
High-throughput machine learning-aided antibody discovery for cell surface antigens
作者Deepash Kothiwal; Aaron W. Kollasch; Murali Anuganti; Nicholas Hollmer; Anita Ghosh; Roushu Zhang; Haiying Li; Steffanie B. Paul; Ruitong Li; Yvrick Zagar; Mina Abdollahi; Zachary Anderson; Filmawit Belay; Matt Salotto; Sophia Ulmer; Youssef Atef Abdelalim; Aditi Kachare; Satyendra Kumar; Mahesh Vangala; Chang Yang; Alain Chedotal; Joseph G. Jardine; Andre A.R. Teixeira; Deborah J. Moshinsky; Haisun Zhu; Shaotong Zhu; Timothy A. Springer; Debora S. Marks; Rob Meijers
作者单位Institute for Protein Innovation, Boston, MA 02115, USA; Department of Systems Biology, Harvard Medical School, Boston, MA, USA; Broad Institute of Harvard and MIT, Cambridge, MA, USA; Sorbonne Université, INSERM, CNRS, Institut de la Vision, Paris, France; Institut de Pathologie, Groupe Hospitalier Est, hospices Civils de Lyon, Lyon, France; MeLiS, CNRS UMR5284, Inserm U1314, University Claude Bernard Lyon 1, Lyon, France; Department of Immunology and Microbiology, Scripps Research Institute, La Jolla, CA 92037, USA; IAVI Neutralizing Antibody Center, Scripps Research Institute, La Jolla, CA 92037, USA; Program in Cellular and Molecular Medicine, Boston Children’s Hospital, Boston, MA 02115, USA; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA
Capturing the dynamics of STAT6 macrophage polarization using bioluminescence temporal signatures
作者Shiyuan Zheng; Yi-Hsuan Chiang; Dasia Aldarondo; Alexandra Locke; Jagadambika Gunaje; Jennifer Davis; Zachary R. Fox; Belinda S. Akpa; Elizabeth Wayne
作者单位Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA 15213, USA; Department of Chemical Engineering, Carnegie Mellon University, Pittsburgh, PA 15213, USA; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA; Center for Cardiovascular Biology, University of Washington, Seattle, WA, USA; Department of Lab Medicine and Pathology, University of Washington, Seattle, WA, USA; Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA; Department of Chemical & Biomolecular Engineering, University of Tennessee, Knoxville, TN 37996, USA; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA
Transcriptional competition biases the effects of second messengers in Escherichia coli
作者Andrea Ripamonti; Milan Lacassin; Rossana Droghetti; Gregory Bokinsky; Marco Cosentino Lagomarsino
作者单位Dipartimento di Fisica, Università degli Studi di Milano, via Celoria 16, Milan, Italy; IFOM ETS - The AIRC Institute of Molecular Oncology, via Adamello 16, Milan, Italy; Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, the Netherlands; INFN Sezione di Milano, via Celoria 16, Milan, Italy
Multipair phase-modulated temporal interference electrical stimulation combined with fMRI
作者Iurii Savvateev; Florian Missey; Valeriia Beliaeva; Sofia Peressotti; Marija Markicevic; Diana Kindler; Fabrice Chaudun; Giulia Casarotto; Camilla Bellone; Christian Lüscher; Daniel Razansky; Viktor Jirsa; Adam Williamson; Rafael Polania; Valerio Zerbi
作者单位Decision Neuroscience Lab, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland; International Clinical Research Center, St. Anne’s University Hospital Brno, Brno, Czech Republic; Department of Neurology, Insel University Hospital Bern and University of Bern, Bern, Switzerland; Institute of Pharmacology and Toxicology, Institute for Biomedical Engineering, Faculty of Medicine, University of Zurich, Zurich, Switzerland; Institute for Biomedical Engineering, Department of Information Technology and Electrical Engineering, ETH Zurich, Zurich, Switzerland; Department of Basic Neurosciences, Faculty of Medicine, University of Geneva, Geneva, Switzerland; Aix-Marseille Université, Inserm, Institut de Neurosciences des Systèmes (INS) UMR_S, 1106 Marseille, France; Center for Social and Affective Neuroscience, Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden; Department of Psychiatry, Faculty of Medicine, University of Geneva, Geneva, Switzerland; Centre for Brain, Mind and Markets, Faculty of Business and Economics, The University of Melbourne, Melbourne, VIC, Australia
Modeling chimeric antigen receptor response at the single-cell level with conditional optimal transport
作者Alice Driessen; Jannis Born; Rocio Castellanos Rueda; Sai T. Reddy; Marianna Rapsomaniki
作者单位IBM Research Europe, Zurich, Switzerland; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland; Biomedical Data Science Center, Lausanne University Hospital, Lausanne, Switzerland; Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland; Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland
Fusing imaging and metabolic modeling via multimodal deep learning in ovarian cancer
作者Noushin Eftekhari; Suraj Verma; Aninda Saha; Guido Zampieri; Saladin Sawan; Annalisa Occhipinti; Claudio Angione
作者单位The Alan Turing Institute, London, UK; School of Computing, Engineering & Digital Technologies, Teesside University, Middlesbrough, UK; Department of Radiology, North Tees and Hartlepool NHS Foundation Trust, Stockton-on-Tees, UK; Department of Biology, University of Padova, Padova, Italy; School of Biological Sciences, University of Manchester, Manchester, UK; Centre for Digital Innovation, Teesside University, Middlesbrough, UK; National Horizons Centre, Darlington, UK
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